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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847483.1_cds_XP_016510095.1_22971
CDS Infomation

[gene=LOC107827467] [db_xref=GeneID:107827467] [protein=probable protein phosphatase 2C 12] [protein_id=XP_016510095.1] [location=complement(join(8073..8095,8178..8380,8495..8727,8811..8936,9870..9977,10257..10320,10407..10560,10895..11066,12306..12503))] [gbkey=CDS]
Sequence

ATGTTGTCTAAGGGTGAACATCAAACGGTCCCATTGTCTGTGTTGTTAAAGCGTGAATTG
GCTAATGAGAAGATTGAAAGACCTGAGATTTCTCATGGTCAAGCTAGTCAAAGCAAAAAA
GGCGAAGACTTTACGTTTGTTAAGACCGAATGTCAGCGAGTTTTGGGTGATGGAGTTGCC
ACTTATTCTGTTTTTGGATTATTCGACGGGCACAATGGGTCAGCAGCCGCCATATATGCT
AAAGAAAATCTCTTGCAGAATGTGTTGGGTGCTATTCCTCCAGATCTTAGCAGAGATGAA
TGGATTGCAGCACTTCCTAGAGCTTTGGTTGCAGGATTTGTCAAAACAGATAAAGATTTC
CAAGAAAGAGCAAAAACCTCAGGGACAACAGTCACGTTTGTCATAATTGAAGGATGGGTT
GTAACAGTTGCATCAGTTGGCGATTCTCGGTGCATACTAGAATCAGCTGAAGGAGGAATT
TATTATCTATCAGCTGATCATAGGCTTGACTGCAATGAAGAGGAGAGGGAACGTATAACA
GCCTGTGGTGGAGAAGTTGGCCGGCTTAATGCTGGTGGTGGTACAGAGATTGGTCCTTTG
AGATGTTGGCCTGGTGGACTCTGCCTCTCGAGATCCATTGGAGATATGGATGTTGGTGAA
TATATAGTTCCTGTACCCTATGTGAAGCAAGTGAAGCTATCAGCAGCAGGTGGAAGGCTT
GTAATAGCAAGTGATGGTGTCTGGGATGCTTTATCTGCAGAAATGGCTGTTGAATGCTGT
CACGGAATGCCTGCAGATGCTTCCGCCTCTCAAATTGTTAAAGAAGCTGTACAGCCAAAA
GGGATTCGAGATGATACGACCTGTATTGTGGTCGATATACATCCCCCAGAAAAACCAATT
CCTCCACCGCCTCCCAAAAAGTCAGGAAAAGGAGTATTCAAGTCTATGTTTCGCAAAAGA
ACTTCGGCGTCGTCTTCTGATATTCAGAAAGATTTTTGTGAACCGGATGTAGTGGAAGAA
CTATTTGAGGAAGGATCCGCATCTCTTTCAGACAGGTTAGACGCGAAGTATCCAGTGTGC
AACATGTTTAAGTTATTCATATGTGCGGTCTGTCAAGTGGAGATAAAGCCAGGTCAAGGT
GTTTCAATACATGCTGGCTCCTCGAACACAAGACATTCGCGGCCATGGGATGGACCTTTC
CTATGCTCAAGCTGCCAAGAGAAGAAAGACGCCATGGAAGGAAAGAGACCTTTTGGAGAT
GCAAGATATAATAGTGAGTGA

Peptide Sequence

PEP ID

XP_016510095.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 12 [Nicotiana tabacum]
Sequence

MLSKGEHQTVPLSVLLKRELANEKIERPEISHGQASQSKKGEDFTFVKTECQRVLGDGVA
TYSVFGLFDGHNGSAAAIYAKENLLQNVLGAIPPDLSRDEWIAALPRALVAGFVKTDKDF
QERAKTSGTTVTFVIIEGWVVTVASVGDSRCILESAEGGIYYLSADHRLDCNEEERERIT
ACGGEVGRLNAGGGTEIGPLRCWPGGLCLSRSIGDMDVGEYIVPVPYVKQVKLSAAGGRL
VIASDGVWDALSAEMAVECCHGMPADASASQIVKEAVQPKGIRDDTTCIVVDIHPPEKPI
PPPPPKKSGKGVFKSMFRKRTSASSSDIQKDFCEPDVVEELFEEGSASLSDRLDAKYPVC
NMFKLFICAVCQVEIKPGQGVSIHAGSSNTRHSRPWDGPFLCSSCQEKKDAMEGKRPFGD
ARYNSE

Transcript Sequence

Gene sequence data has not been registered.